Problems compiling modules

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I'm getting the following error trying to compile a module:

Compile Error: Module does not match commandline module

The .bmx file being compiled is located two folders deep under the \BlitzMax\mod\ directory, as per the BlitzMax Help file (i.e. \mymod.mod\myprog.mod\myprog.bmx).

Inside the source file I have the command at the top (after a 'SuperStrict' command) as follows:

module mymod.myprog

Any ideas why I'm getting this error?